Edit Your Collection

October 16, 2023

16 Oct Edit Your Collection

Posted at 14:46h in by

← Go back

HTML BlockResponses to the following questions (1-28) will be components of the USCCN online searchable database available to all users.
1. Name of Collection Point of ContactPerrine Portier
3. Collection phone number+33241225719
4. Collection Address42 Rue Georges Morel
Beaucouzé, Pays de la Loire 49070
France
Map It
5. Collection emailEmail hidden; Javascript is required.
6. Collection website (if applicable)cirm-cfbp.fr
7. Collection name and abbreviationFrench Collection for Plant-associated Bacteria CIRM-CFBP
8. Collection WDCM number (if applicable)639
9. Number of staff that work with the collection (if applicable)3
10. Organizational structure of the Collection:
  • Government Agency
11. What type of organisms are included in the Collection?
  • Bacteria
12. Do you have sequencing data?Yes
Please specify what kind of dataHouse keeping genes, Complete genome sequences
14. Upload a spreadsheet listing out each species along with the quantity.CIRM-CFBP-USCCN-registration-March2023.xlsx
15. Please choose one of the following categories that best describes your collection.Publicly available (qualified curator, collection management policies, microbial specimens, a database of collection information, an online strain catalog, and distributes strains to the scientific community)
16. What host associations, if any, does your microbial collection have?
  • Grain crops
  • Fruits
  • Vegetables
  • Other Plants
17. What institution/entity currently houses your collection? (For example, Kansas State University, ARS, private entity)INRAE
18. Is the institution able to guarantee its support to the Collection for the next three to five years?Yes
19. Does your collection have the ability to accept orphan collections at this time? If yes, please describe your capacity to do so.Yes
Capacity

Upon examination of the detail of the collection.
Acceptance will depend on the topic of the collection, quality of associated metadata, form of preservation and our capacity to accept these new strains (depends a lot on how they are preserved in the first place)

20. Does your collection contain strains that are currently used or could be used for reference strains such as to identify human, animal or plant pathogens? If yes, please explainYes
Capacity

We have representatives of the diversity of almost all cultivable plant pathogens

21. Do you utilize best practices guidelines for operation of your culture collection?
  • OECD Best Practices Guidelines for Biological Resource Centres (https://www.oecd.org/health/biotech/oecdbestpracticeguidelinesforbiologicalresourcecentres.htm)
22. What is/are the mechanism(s) of availability and distribution?
  • Fee per strain for distribution
  • Culture exchange
  • Peer to peer for collaborations
23. What are the main subjects or fields of use relevant to your collection?
  • Agriculture
  • Ecology
  • Freeze drying and cryopreservation
  • General microbiology
  • Genetics
  • Plant pathology
  • Systematics and taxonomy
24. If applicable, what services does your Collection provide? Check all that apply
  • Storage service (safe deposit)
  • Strain isolation/taxonomic identification
  • Custom material preparation (such as genomic DNA/RNA)
25. Does your Collection provide training opportunities on the following? Check all that apply
  • Does not provide training
26. If applicable, does your Collection provide consultation on the following? Check all that apply
  • Does not provide consultation
27. What institutions fund research that users perform using specimens from your collection? Check all that apply
  • Other(please explain)
Institutions fund research

French and European institutions

28. Is the Collection willing, within reasonable limits and to the extent that the collection is public, to engage in the exchange of cultures with other collections within the framework of the USCCN?Yes
29. Is the Collection willing to engage, within the limits of its capacity to do so, in collaborative programs with other culture collections for the general betterment of the USCCN?Yes
30. Do you wish to be contacted by researchers and collaborators about your Collection?Yes
31. Would you be interested in collaborating on a project with samples combined from different repositories?Yes
HTML BlockResponses to the following questions (29-36) will NOT be components of the USCCN online database. Information provided will be for internal use only to enhance USCCN service to participants.
32. Is the future of your collection dependent on a single individual in the institution?No
33. Is there a contingency plan to be able to guarantee the existence of the collection for at least five years, such as at another institution? Please provide as much detail as possible.No
No Contingency Plan

Our institution is willing to provide support to our collection. No need for specific contingency plan

34. Is your collection currently or in potential danger of becoming an orphan collection? If yes, what means do you have to save the collection? Please provide as much detail as possible.No
35. Would you like assistance with the orphan collection?No
36. What are the greatest needs of your collection at this time? (For example: stable funding, personnel needs, quality control procedures, capacity & equipment, visibility, etc.)

More human resources

37. Would you like your collection to be listed in the Global Biodiversity Information Facility (GBIF) https://www.gbif.org/No
38. Does the Collection support the USCCN mission, which is "to facilitate the safe and responsible utilization of microbial resources for research, education, industry, medicine, and agriculture for the betterment of humankind by providing opportunities for US culture collection workers to engage with each other and with the broader culture collection community."I disagree with the stated mission.
If you disagree with the current mission of USCCN, please provide additional information about your recommendation for the mission.

We are not in the US, it's difficult for us to fully agree with the stated mission